A transposon-derived small RNA regulates gene expression in Salmonella Typhimurium.
Ellis MJ, Trussler RS, Charles O, Haniford DB.
Nucleic Acids Res. 2017 Feb 21. doi: 10.1093/nar/gkx094. [Epub ahead of print]
PMID: 28335027 [PubMed]
Riboregulation of bacterial and archaeal transposition.
Ellis MJ, Haniford DB.
Wiley Interdiscip Rev RNA. 2016 May;7(3):382-98. doi: 10.1002/wrna.1341.
PMID: 26846462 [PubMed]
Haniford DB, Ellis MJ.
Microbiol Spectr. 2015 Feb;3(1). doi: 10.1128/microbiolspec.MDNA3-0002-2014.
PMID: 26104553 [PubMed]
Ellis MJ, Trussler RS, Haniford DB.
Nucleic Acids Res. 2015 Jun 4. pii: gkv584. [Epub ahead of print]
PMID: 26044710 [PubMed]
Hfq binds directly to the ribosome-binding site of IS10 transposase mRNA to inhibit translation.
Ellis MJ, Trussler RS, Haniford DB.
Mol Microbiol. 2015 May;96(3):633-50. doi: 10.1111/mmi. 12961. Epub 2015 Mar 11.
PMID: 25649688 [PubMed]
Probing Hfq:RNA Interactions with Hydroxyl Radical and RNase Footprinting.
Ellis MJ, Trussler RS, Ross JA, Haniford DB.
Methods Mol Biol. 2015;1259:403-15. doi: 10.1007/978-1-4939-2214-7_24.
PMID: 25579599 [PubMed]
Ross JA, Trussler RS, Black MD, McLellan CR, Haniford DB.
Mob DNA. 2014 Nov 30;5(1):27. doi: 10.1186/s13100-014-0027-z. eCollection 2014.
PMID: 25506402 [PubMed]
Free PMC Article
Hfq restructures RNA-IN and RNA-OUT and facilitates antisense pairing in the Tn10/IS10 system.
Ross JA, Ellis MJ, Hossain S, Haniford DB.
RNA. 2013 May;19(5):670-84. doi:10.1261/rna.037747.112. Epub 2013 Mar 19.
PMID: 23510801 [PubMed - indexed for MEDLINE]
Free PMC Article
Whitfield CR, Shilton BH, Haniford DB.
Mob DNA. 2012 Apr 13;3:7. doi: 10.1186/1759-8753-3-7.
PMID: 22503096 [PubMed]
Free PMC Article
H-NS mediates
the dissociation of a refractory protein-DNA complex during Tn10/IS10
transposition.
Liu D, Haniford DB, Chalmers RM.
Nucleic Acids Res. 2011 Aug;39(15):6660-8. Epub 2011 May 11
PMID: 21565798 [PubMed - as supplied by publisher]
Free Article
Ross JA, Wardle SJ, Haniford DB.
Mol Microbiol. 2010 Nov;78(3):607-21. doi: 10.1111/j.1365-2958.2010.07359.x.
Epub 2010 Sep 22.
PMID: 20815820 [PubMed - indexed for MEDLINE]
H-NS binds with
high affinity to the Tn10 transpososome and promotes transpososome
stabilization.
Wardle SJ, Chan A, Haniford DB.
Nucleic Acids Res. 2009 Oct;37(18):6148-60. Epub 2009 Aug 20.
PMID: 19696075 [PubMed - indexed for MEDLINE]
Free PMC Article
Whitfield CR, Wardle SJ, Haniford DB.
Nucleic Acids Res. 2009 Feb;37(2):309-21. Epub 2008 Nov 28.
PMID:19042975 [PubMed - indexed for MEDLINE]
Free PMC Article
Singh RK, Liburd J, Wardle SJ, Haniford DB.
J Mol Biol. 2008 Feb 29;376(4):950-62. Epub 2007 Dec 23.
PMID: 18191147 [PubMed - indexed for MEDLINE]
Mizuuchi M, Rice PA, Wardle SJ, Haniford DB, Mizuuchi K.
Proc Natl Acad Sci U S A. 2007 Sep 11;104(37):14622-7. Epub 2007 Sep 4.
PMID: 17785414 [PubMed - indexed for MEDLINE]
Free PMC Article
Structure/function analysis of the phosphatidylinositol-3-kinase domain of yeast
tra1.
Mutiu AI, Hoke SM, Genereaux J, Hannam C, MacKenzie K, Jobin-Robitaille O, Guzzo
J, Côté J, Andrews B, Haniford DB, Brandl CJ.
Genetics. 2007 Sep;177(1):151-66. Epub 2007 Jul 29.
PMID: 17660562 [PubMed - indexed for MEDLINE]
Free PMC Article
Ward CM, Wardle SJ, Singh RK, Haniford DB.
Mol Microbiol. 2007 May;64(4):1000-13.
PMID: 17501923 [PubMed - indexed for MEDLINE]
Transpososome
dynamics and regulation in Tn10 transposition.
Haniford DB.
Crit Rev Biochem Mol Biol. 2006 Nov-Dec;41(6):407-24. Review.
PMID: 17092825 [PubMed - indexed for MEDLINE]
Formation,
characterization and partial purification of a Tn5 strand transfer complex.
Whitfield CR, Wardle SJ, Haniford DB.
J Mol Biol. 2006 Dec 1;364(3):290-301. Epub 2006 Sep 16.
PMID: 17014865 [PubMed - indexed for MEDLINE]
The global
regulator H-NS acts directly on the transpososome to promote Tn10 transposition.
Wardle SJ, O'Carroll M, Derbyshire KM, Haniford DB.
Genes Dev. 2005 Sep 15;19(18):2224-35.
PMID: 16166383 [PubMed - indexed for MEDLINE]
Free PMC Article
Humayun S, Wardle SJ, Shilton BH, Pribil PA, Liburd J, Haniford DB.
J Mol Biol. 2005 Feb 25;346(3):703-16. Epub 2005 Jan 18.
PMID: 15713457 [PubMed - indexed for MEDLINE]
Pribil PA, Wardle SJ, Haniford DB.
Mol Microbiol. 2004 May;52(4):1173-86.
PMID: 15130133 [PubMed - indexed for MEDLINE]
Swingle B, O'Carroll M, Haniford D, Derbyshire KM.
Mol Microbiol. 2004 May;52(4):1055-67.
PMID: 15130124 [PubMed - indexed for MEDLINE]
Pribil PA, Haniford DB.
J Mol Biol. 2003 Jul 4;330(2):247-59.
PMID: 12823965 [PubMed - indexed for MEDLINE]
Stewart BJ, Wardle SJ, Haniford DB.
EMBO J. 2002 Aug 15;21(16):4380-90.
PMID:12169640 [PubMed - indexed for MEDLINE]
Free PMC Article
Mechanisms of metal ion action in Tn10 transposition.
Allingham JS, Haniford DB.
J Mol Biol. 2002 May 24;319(1):53-65.
PMID:12051936 [PubMed - indexed for MEDLINE]